LIVE RESEARCH RESULTS
Cancer TF Discovery
Atlas
Interactive 3D exploration of transcription factors driving 5 cancer subtypes — discovered from TCGA Pan-Cancer RNA-Seq gene expression data using Random Forest feature importance.
98.76%
Accuracy
19
TFs Found
801
Samples
3.36×
Enrichment
BRCA(300)
KIRC(146)
LUAD(141)
PRAD(136)
COAD(78)
LOADING GENOME
# Breast Invasive Carcinoma (BRCA)
# Kidney Renal Clear Cell (KIRC)
# Lung Adenocarcinoma (LUAD)
# Prostate Adenocarcinoma (PRAD)
# Colon Adenocarcinoma (COAD)
# Breast Invasive Carcinoma (BRCA)
# Kidney Renal Clear Cell (KIRC)
# Lung Adenocarcinoma (LUAD)
# Prostate Adenocarcinoma (PRAD)
# Colon Adenocarcinoma (COAD)
# Breast Invasive Carcinoma (BRCA)
# Kidney Renal Clear Cell (KIRC)
# Lung Adenocarcinoma (LUAD)
# Prostate Adenocarcinoma (PRAD)
# Colon Adenocarcinoma (COAD)
Inference Engine
Live Patient Predictor
Input RNA-Seq expression levels to predict cancer subtype and identify which transcription factors are actively driving the disease.
Patient RNA-Seq Input
Load a sample or paste 500 gene expression values
Awaiting patient profile.
Run inference to discover active TF drivers.
100 Decision Trees · 500 Genes · 5 Cancer Types
🎯
🎯
0.00%
Model Accuracy
Random Forest Classifier
🧬
🧬
0
TFs Identified
in top 500 genes
📈
📈
0.00×
TF Enrichment
vs non-TF genes
🏥
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0
Patient Samples
TCGA Pan-Cancer
Dataset Composition
Cancer Type Breakdown
801SAMPLES
BRCA300 samples
Breast Invasive Carcinoma
KIRC146 samples
Kidney Renal Clear Cell
LUAD141 samples
Lung Adenocarcinoma
PRAD136 samples
Prostate Adenocarcinoma
COAD78 samples
Colon Adenocarcinoma
Top TF per Cancer Type
BRCABreast Invasive Carcinoma
GATA3#5
TCF20#7
GRHL2#54
KIRCKidney Renal Clear Cell
HNF1B#1
PAX8#29
PAX2#65
LUADLung Adenocarcinoma
NKX2-1#31
PRADProstate Adenocarcinoma
NKX3-1#76
ETV4#280
COADColon Adenocarcinoma
CDX1#77
CDX2#78